Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44771-201ENSMUST00000206975 626 ntBASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk5rap1Q8BTW8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm6376-201ENSMUST00000209407 580 ntBASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk5rap1Q8BTW8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm12497-201ENSMUST00000138778 237 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm25406-201ENSMUST00000157599 105 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44357-201ENSMUST00000195897 142 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm19658-201ENSMUST00000196231 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44367-201ENSMUST00000196836 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44350-201ENSMUST00000197197 138 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms