Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpne3Q8BT60 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.63■□□□□ 0.09
Cpne3Q8BT60 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cpne3Q8BT60 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Gm10566-201ENSMUST00000086739 996 ntBASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpne3Q8BT60 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms