Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.13■□□□□ 0.33
Rd3Q8BRE0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rd3Q8BRE0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rd3Q8BRE0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rd3Q8BRE0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Gm36967-201ENSMUST00000193814 266 ntBASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rd3Q8BRE0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Gm12497-201ENSMUST00000138778 237 ntBASIC17.1■□□□□ 0.33
Rd3Q8BRE0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Gm8655-201ENSMUST00000221159 852 ntBASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rd3Q8BRE0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rd3Q8BRE0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms