Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4Q8BQZ5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.72■□□□□ 0.11
Cpsf4Q8BQZ5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Cpsf4Q8BQZ5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf4Q8BQZ5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf4Q8BQZ5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf4Q8BQZ5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf4Q8BQZ5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf4Q8BQZ5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpsf4Q8BQZ5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Phf7-203ENSMUST00000226565 1971 ntBASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpsf4Q8BQZ5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Gm11355-201ENSMUST00000121120 306 ntBASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Gm5587-201ENSMUST00000206270 674 ntBASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf4Q8BQZ5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms