Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col16a1Q8BLX7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Gm44335-201ENSMUST00000196879 141 ntBASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Gm44297-201ENSMUST00000198304 141 ntBASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Gm44346-201ENSMUST00000198851 141 ntBASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col16a1Q8BLX7 Gm5366-201ENSMUST00000215494 1338 ntBASIC21.08■□□□□ 0.96
Col16a1Q8BLX7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Gm18489-201ENSMUST00000172565 551 ntBASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col16a1Q8BLX7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Gm13294-201ENSMUST00000121757 1330 ntBASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Gm13365-201ENSMUST00000121188 973 ntBASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Gm11745-201ENSMUST00000121669 448 ntBASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col16a1Q8BLX7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col16a1Q8BLX7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Gm20949-201ENSMUST00000206478 952 ntBASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms