Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Csnk1a1Q8BK63 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnk1a1Q8BK63 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Gm10052-201ENSMUST00000168019 960 ntBASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Gm7729-201ENSMUST00000050143 801 ntBASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnk1a1Q8BK63 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnk1a1Q8BK63 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnk1a1Q8BK63 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms