Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim23Q8BGX0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim23Q8BGX0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim23Q8BGX0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim23Q8BGX0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.57■□□□□ 0.08
Trim23Q8BGX0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Birc2-201ENSMUST00000054878 378 ntBASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim23Q8BGX0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Mir6404-201ENSMUST00000183699 94 ntBASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Gm34391-201ENSMUST00000203706 907 ntBASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim23Q8BGX0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Gm15165-201ENSMUST00000118140 502 ntBASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim23Q8BGX0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms