Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Samm50Q8BGH2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Samm50Q8BGH2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Actl10-202ENSMUST00000226583 1501 ntBASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Gm25016-201ENSMUST00000158399 131 ntBASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Samm50Q8BGH2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Samm50Q8BGH2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Samm50Q8BGH2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Samm50Q8BGH2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms