Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Mir1199-201ENSMUST00000117015 119 ntBASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.69□□□□□ -0.22
Upk3bQ80YF6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3bQ80YF6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3bQ80YF6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk3bQ80YF6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms