Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Birc2-201ENSMUST00000054878 378 ntBASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrtm4Q80XG9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrtm4Q80XG9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Lrrtm4Q80XG9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lrrtm4Q80XG9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Gm43347-201ENSMUST00000200226 580 ntBASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrtm4Q80XG9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Lrrtm4Q80XG9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms