Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim36Q80WG7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim36Q80WG7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.62■□□□□ 0.09
Trim36Q80WG7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.62■□□□□ 0.09
Trim36Q80WG7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Gm10013-201ENSMUST00000106074 672 ntBASIC15.62■□□□□ 0.09
Trim36Q80WG7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim36Q80WG7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Gm21362-201ENSMUST00000194272 928 ntBASIC15.62■□□□□ 0.09
Trim36Q80WG7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim36Q80WG7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.61■□□□□ 0.09
Trim36Q80WG7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trim36Q80WG7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim36Q80WG7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms