Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh19Q80TF3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdh19Q80TF3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh19Q80TF3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Gm44771-201ENSMUST00000206975 626 ntBASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh19Q80TF3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Gm6376-201ENSMUST00000209407 580 ntBASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh19Q80TF3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms