Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Mir1895-201ENSMUST00000122615 79 ntBASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rpap1Q80TE0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rpap1Q80TE0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Gm6257-201ENSMUST00000163864 910 ntBASIC24.91■■□□□ 1.58
Rpap1Q80TE0 AA543401-201ENSMUST00000164248 1269 ntBASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Gm45747-201ENSMUST00000212203 999 ntBASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rpap1Q80TE0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rpap1Q80TE0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Gm12892-201ENSMUST00000117367 1146 ntBASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Gm5186-201ENSMUST00000218781 920 ntBASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rpap1Q80TE0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.57
Rpap1Q80TE0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rpap1Q80TE0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rpap1Q80TE0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Gm45612-201ENSMUST00000211320 160 ntBASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Gm5366-201ENSMUST00000215494 1338 ntBASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Rpap1Q80TE0 Gm15427-201ENSMUST00000117288 531 ntBASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Gm5177-201ENSMUST00000183092 997 ntBASIC24.87■■□□□ 1.57
Rpap1Q80TE0 AC158538.2-201ENSMUST00000225455 906 ntBASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms