Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdp1Q7TSG2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Gm15565-201ENSMUST00000118890 427 ntBASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdp1Q7TSG2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm30025-201ENSMUST00000218555 728 ntBASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdp1Q7TSG2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctdp1Q7TSG2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctdp1Q7TSG2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctdp1Q7TSG2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Gm18958-201ENSMUST00000174258 762 ntBASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.64■□□□□ 0.41
Ctdp1Q7TSG2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms