Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac4Q6NZM9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 AA414768-201ENSMUST00000121924 1257 ntBASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac4Q6NZM9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Hdac4Q6NZM9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Hdac4Q6NZM9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac4Q6NZM9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac4Q6NZM9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Hdac4Q6NZM9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac4Q6NZM9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Hdac4Q6NZM9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac4Q6NZM9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Gm45328-201ENSMUST00000210942 917 ntBASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms