Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Gm15375-201ENSMUST00000119510 849 ntBASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 App-207ENSMUST00000227737 2827 ntBASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube1Q6NZL8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.59■□□□□ 0.09
Scube1Q6NZL8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scube1Q6NZL8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scube1Q6NZL8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scube1Q6NZL8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scube1Q6NZL8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scube1Q6NZL8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.58■□□□□ 0.09
Scube1Q6NZL8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube1Q6NZL8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scube1Q6NZL8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms