Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Krt42Q6IFX2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.65■□□□□ 0.26
Krt42Q6IFX2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Gm27275-201ENSMUST00000184318 272 ntBASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Gm43183-201ENSMUST00000200632 547 ntBASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt42Q6IFX2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt42Q6IFX2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms