Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.41■□□□□ 0.86
Clcn1Q64347 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn1Q64347 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Gm14140-201ENSMUST00000119999 995 ntBASIC20.4■□□□□ 0.86
Clcn1Q64347 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
Clcn1Q64347 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.4■□□□□ 0.86
Clcn1Q64347 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Clcn1Q64347 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.4■□□□□ 0.86
Clcn1Q64347 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.4■□□□□ 0.86
Clcn1Q64347 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.4■□□□□ 0.86
Clcn1Q64347 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Clcn1Q64347 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Clcn1Q64347 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.4■□□□□ 0.86
Clcn1Q64347 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.4■□□□□ 0.86
Clcn1Q64347 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn1Q64347 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn1Q64347 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn1Q64347 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn1Q64347 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn1Q64347 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn1Q64347 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn1Q64347 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Clcn1Q64347 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Clcn1Q64347 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.39■□□□□ 0.85
Clcn1Q64347 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Clcn1Q64347 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn1Q64347 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn1Q64347 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.38■□□□□ 0.85
Clcn1Q64347 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn1Q64347 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn1Q64347 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Gm12497-201ENSMUST00000138778 237 ntBASIC20.38■□□□□ 0.85
Clcn1Q64347 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Gm8655-201ENSMUST00000221159 852 ntBASIC20.38■□□□□ 0.85
Clcn1Q64347 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn1Q64347 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn1Q64347 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC20.38■□□□□ 0.85
Clcn1Q64347 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.37■□□□□ 0.85
Clcn1Q64347 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.37■□□□□ 0.85
Clcn1Q64347 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.37■□□□□ 0.85
Clcn1Q64347 Gm9727-201ENSMUST00000161387 555 ntBASIC20.37■□□□□ 0.85
Clcn1Q64347 Gm6736-201ENSMUST00000166583 948 ntBASIC20.37■□□□□ 0.85
Clcn1Q64347 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.37■□□□□ 0.85
Clcn1Q64347 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.37■□□□□ 0.85
Clcn1Q64347 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn1Q64347 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.37■□□□□ 0.85
Clcn1Q64347 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Gm14822-201ENSMUST00000122247 291 ntBASIC20.36■□□□□ 0.85
Clcn1Q64347 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.36■□□□□ 0.85
Clcn1Q64347 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Gm36967-201ENSMUST00000193814 266 ntBASIC20.36■□□□□ 0.85
Clcn1Q64347 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.36■□□□□ 0.85
Clcn1Q64347 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.36■□□□□ 0.85
Clcn1Q64347 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Clcn1Q64347 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Clcn1Q64347 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms