Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.58■□□□□ 0.24
Six1Q62231 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Six1Q62231 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.58■□□□□ 0.24
Six1Q62231 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six1Q62231 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Six1Q62231 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.57■□□□□ 0.24
Six1Q62231 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.57■□□□□ 0.24
Six1Q62231 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.57■□□□□ 0.24
Six1Q62231 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.57■□□□□ 0.24
Six1Q62231 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Six1Q62231 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six1Q62231 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Six1Q62231 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Six1Q62231 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Six1Q62231 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Gm18959-201ENSMUST00000208954 655 ntBASIC16.56■□□□□ 0.24
Six1Q62231 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Six1Q62231 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Six1Q62231 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Six1Q62231 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Six1Q62231 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.56■□□□□ 0.24
Six1Q62231 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six1Q62231 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.56■□□□□ 0.24
Six1Q62231 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Six1Q62231 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.55■□□□□ 0.24
Six1Q62231 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.55■□□□□ 0.24
Six1Q62231 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.55■□□□□ 0.24
Six1Q62231 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Six1Q62231 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Six1Q62231 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six1Q62231 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Six1Q62231 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.54■□□□□ 0.24
Six1Q62231 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.54■□□□□ 0.24
Six1Q62231 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Six1Q62231 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.54■□□□□ 0.24
Six1Q62231 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.54■□□□□ 0.24
Six1Q62231 Gm21559-201ENSMUST00000220638 855 ntBASIC16.54■□□□□ 0.24
Six1Q62231 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Gm8587-201ENSMUST00000076538 843 ntBASIC16.54■□□□□ 0.24
Six1Q62231 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms