Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.93■□□□□ 0.62
Scn9aQ62205 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.93■□□□□ 0.62
Scn9aQ62205 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.93■□□□□ 0.62
Scn9aQ62205 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn9aQ62205 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scn9aQ62205 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn9aQ62205 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Scn9aQ62205 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scn9aQ62205 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.92■□□□□ 0.62
Scn9aQ62205 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.92■□□□□ 0.62
Scn9aQ62205 Gm43474-201ENSMUST00000196415 774 ntBASIC18.92■□□□□ 0.62
Scn9aQ62205 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.92■□□□□ 0.62
Scn9aQ62205 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scn9aQ62205 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scn9aQ62205 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn9aQ62205 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn9aQ62205 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn9aQ62205 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Scn9aQ62205 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn9aQ62205 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn9aQ62205 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Scn9aQ62205 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.91■□□□□ 0.62
Scn9aQ62205 Gm7787-201ENSMUST00000216858 688 ntBASIC18.91■□□□□ 0.62
Scn9aQ62205 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn9aQ62205 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn9aQ62205 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.9■□□□□ 0.62
Scn9aQ62205 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.9■□□□□ 0.62
Scn9aQ62205 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.9■□□□□ 0.62
Scn9aQ62205 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.9■□□□□ 0.62
Scn9aQ62205 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Scn9aQ62205 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn9aQ62205 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.89■□□□□ 0.62
Scn9aQ62205 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn9aQ62205 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn9aQ62205 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn9aQ62205 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn9aQ62205 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.89■□□□□ 0.61
Scn9aQ62205 Gm15358-201ENSMUST00000119249 520 ntBASIC18.89■□□□□ 0.61
Scn9aQ62205 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.89■□□□□ 0.61
Scn9aQ62205 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.89■□□□□ 0.61
Scn9aQ62205 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scn9aQ62205 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn9aQ62205 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn9aQ62205 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn9aQ62205 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn9aQ62205 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn9aQ62205 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms