Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Foxc1Q61572 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Foxc1Q61572 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Ank2-226ENSMUST00000189368 339 ntBASIC11.89□□□□□ -0.51
Foxc1Q61572 Gm5587-201ENSMUST00000206270 674 ntBASIC11.89□□□□□ -0.51
Foxc1Q61572 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Foxc1Q61572 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.89□□□□□ -0.51
Foxc1Q61572 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxc1Q61572 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Foxc1Q61572 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Gm6546-201ENSMUST00000192096 766 ntBASIC11.88□□□□□ -0.51
Foxc1Q61572 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Foxc1Q61572 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.88□□□□□ -0.51
Foxc1Q61572 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxc1Q61572 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Foxc1Q61572 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.88□□□□□ -0.51
Foxc1Q61572 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.87□□□□□ -0.51
Foxc1Q61572 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.87□□□□□ -0.51
Foxc1Q61572 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms