Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.22■□□□□ 0.03
Sox17Q61473 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.22■□□□□ 0.03
Sox17Q61473 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.22■□□□□ 0.03
Sox17Q61473 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Sox17Q61473 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sox17Q61473 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Gm8495-201ENSMUST00000188740 694 ntBASIC15.21■□□□□ 0.03
Sox17Q61473 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.21■□□□□ 0.03
Sox17Q61473 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox17Q61473 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sox17Q61473 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.21■□□□□ 0.02
Sox17Q61473 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox17Q61473 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Sox17Q61473 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox17Q61473 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox17Q61473 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox17Q61473 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sox17Q61473 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox17Q61473 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sox17Q61473 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.2■□□□□ 0.02
Sox17Q61473 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Sox17Q61473 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sox17Q61473 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sox17Q61473 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox17Q61473 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Sox17Q61473 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sox17Q61473 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Sox17Q61473 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Sox17Q61473 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox17Q61473 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox17Q61473 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Sox17Q61473 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.19■□□□□ 0.02
Sox17Q61473 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.19■□□□□ 0.02
Sox17Q61473 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sox17Q61473 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox17Q61473 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.19■□□□□ 0.02
Sox17Q61473 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms