Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Clcn4Q61418 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.92□□□□□ -0.02
Clcn4Q61418 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Clcn4Q61418 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Clcn4Q61418 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.91□□□□□ -0.02
Clcn4Q61418 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Clcn4Q61418 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Clcn4Q61418 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.91□□□□□ -0.02
Clcn4Q61418 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Clcn4Q61418 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.91□□□□□ -0.02
Clcn4Q61418 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.91□□□□□ -0.02
Clcn4Q61418 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.91□□□□□ -0.02
Clcn4Q61418 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.91□□□□□ -0.02
Clcn4Q61418 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Clcn4Q61418 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn4Q61418 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.9□□□□□ -0.02
Clcn4Q61418 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Clcn4Q61418 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.9□□□□□ -0.02
Clcn4Q61418 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.9□□□□□ -0.02
Clcn4Q61418 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Clcn4Q61418 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Clcn4Q61418 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.9□□□□□ -0.02
Clcn4Q61418 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Clcn4Q61418 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn4Q61418 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.89□□□□□ -0.03
Clcn4Q61418 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.89□□□□□ -0.03
Clcn4Q61418 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Clcn4Q61418 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn4Q61418 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Clcn4Q61418 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms