Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.31■□□□□ 0.2
Six4Q61321 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.31■□□□□ 0.2
Six4Q61321 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.31■□□□□ 0.2
Six4Q61321 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Six4Q61321 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.31■□□□□ 0.2
Six4Q61321 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.31■□□□□ 0.2
Six4Q61321 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.31■□□□□ 0.2
Six4Q61321 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.3■□□□□ 0.2
Six4Q61321 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Six4Q61321 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.3■□□□□ 0.2
Six4Q61321 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Six4Q61321 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.3■□□□□ 0.2
Six4Q61321 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.3■□□□□ 0.2
Six4Q61321 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Six4Q61321 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six4Q61321 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Six4Q61321 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Six4Q61321 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Six4Q61321 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Six4Q61321 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.29■□□□□ 0.2
Six4Q61321 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.29■□□□□ 0.2
Six4Q61321 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six4Q61321 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Six4Q61321 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.28■□□□□ 0.2
Six4Q61321 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six4Q61321 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Six4Q61321 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.27■□□□□ 0.2
Six4Q61321 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Six4Q61321 Gm28033-201ENSMUST00000184224 96 ntBASIC16.27■□□□□ 0.2
Six4Q61321 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.27■□□□□ 0.2
Six4Q61321 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms