Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm23616-201ENSMUST00000177797 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm25871-201ENSMUST00000177816 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm24752-201ENSMUST00000178240 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm24496-201ENSMUST00000178287 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm25649-201ENSMUST00000178476 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm25548-201ENSMUST00000178681 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm23147-201ENSMUST00000178841 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm26095-201ENSMUST00000179270 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm22171-201ENSMUST00000179283 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm23936-201ENSMUST00000179354 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm22619-201ENSMUST00000179516 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm25255-201ENSMUST00000179579 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm24755-201ENSMUST00000179691 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm26506-201ENSMUST00000179692 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm25086-201ENSMUST00000179931 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm23243-201ENSMUST00000180047 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm24659-201ENSMUST00000180212 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm24169-201ENSMUST00000180244 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm23689-201ENSMUST00000180354 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm27359-201ENSMUST00000184153 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm27785-201ENSMUST00000184268 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm27466-201ENSMUST00000184396 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm27703-201ENSMUST00000184836 110 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col11a1Q61245 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.01■□□□□ 0.47
Col11a1Q61245 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.01■□□□□ 0.47
Col11a1Q61245 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.01■□□□□ 0.47
Col11a1Q61245 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.01■□□□□ 0.47
Col11a1Q61245 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col11a1Q61245 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col11a1Q61245 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col11a1Q61245 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col11a1Q61245 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Col11a1Q61245 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18■□□□□ 0.47
Col11a1Q61245 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col11a1Q61245 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Gm18889-201ENSMUST00000174284 929 ntBASIC18■□□□□ 0.47
Col11a1Q61245 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18■□□□□ 0.47
Col11a1Q61245 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col11a1Q61245 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col11a1Q61245 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.99■□□□□ 0.47
Col11a1Q61245 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col11a1Q61245 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col11a1Q61245 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.99■□□□□ 0.47
Col11a1Q61245 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col11a1Q61245 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col11a1Q61245 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col11a1Q61245 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col11a1Q61245 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col11a1Q61245 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.98■□□□□ 0.47
Col11a1Q61245 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Col11a1Q61245 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.98■□□□□ 0.47
Col11a1Q61245 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Gm19164-201ENSMUST00000210667 640 ntBASIC17.98■□□□□ 0.47
Col11a1Q61245 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col11a1Q61245 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Col11a1Q61245 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Gm9385-201ENSMUST00000117563 472 ntBASIC17.98■□□□□ 0.47
Col11a1Q61245 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col11a1Q61245 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col11a1Q61245 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col11a1Q61245 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col11a1Q61245 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.97■□□□□ 0.47
Col11a1Q61245 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col11a1Q61245 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col11a1Q61245 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.97■□□□□ 0.47
Col11a1Q61245 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col11a1Q61245 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col11a1Q61245 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col11a1Q61245 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.97■□□□□ 0.47
Col11a1Q61245 Gm5866-201ENSMUST00000177881 973 ntBASIC17.97■□□□□ 0.47
Col11a1Q61245 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms