Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hcfc1Q61191 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm15427-201ENSMUST00000117288 531 ntBASIC13.51□□□□□ -0.25
Hcfc1Q61191 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.51□□□□□ -0.25
Hcfc1Q61191 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm15358-201ENSMUST00000119249 520 ntBASIC13.51□□□□□ -0.25
Hcfc1Q61191 Gm13616-201ENSMUST00000120600 222 ntBASIC13.51□□□□□ -0.25
Hcfc1Q61191 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.51□□□□□ -0.25
Hcfc1Q61191 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.51□□□□□ -0.25
Hcfc1Q61191 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcfc1Q61191 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.5□□□□□ -0.25
Hcfc1Q61191 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Gm45747-201ENSMUST00000212203 999 ntBASIC13.5□□□□□ -0.25
Hcfc1Q61191 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hcfc1Q61191 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gm27301-201ENSMUST00000184012 127 ntBASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gm18246-201ENSMUST00000221023 728 ntBASIC13.49□□□□□ -0.25
Hcfc1Q61191 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.49□□□□□ -0.25
Hcfc1Q61191 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.49□□□□□ -0.25
Hcfc1Q61191 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms