Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ptch1Q61115 Gm7774-201ENSMUST00000200064 533 ntBASIC23.22■■□□□ 1.31
Ptch1Q61115 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC23.22■■□□□ 1.31
Ptch1Q61115 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptch1Q61115 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Ptch1Q61115 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptch1Q61115 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ptch1Q61115 Nudt18-203ENSMUST00000228768 1578 ntBASIC23.21■■□□□ 1.31
Ptch1Q61115 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ptch1Q61115 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC23.21■■□□□ 1.31
Ptch1Q61115 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
Ptch1Q61115 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptch1Q61115 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
Ptch1Q61115 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ptch1Q61115 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ptch1Q61115 Dmtn-207ENSMUST00000228001 2437 ntBASIC23.2■■□□□ 1.3
Ptch1Q61115 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ptch1Q61115 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ptch1Q61115 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC23.2■■□□□ 1.3
Ptch1Q61115 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptch1Q61115 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptch1Q61115 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptch1Q61115 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Ptch1Q61115 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC23.19■■□□□ 1.3
Ptch1Q61115 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptch1Q61115 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Gm7336-201ENSMUST00000107041 1232 ntBASIC23.18■■□□□ 1.3
Ptch1Q61115 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC23.18■■□□□ 1.3
Ptch1Q61115 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC23.18■■□□□ 1.3
Ptch1Q61115 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Ptch1Q61115 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Ptch1Q61115 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptch1Q61115 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptch1Q61115 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC23.17■■□□□ 1.3
Ptch1Q61115 Gm10253-201ENSMUST00000194270 940 ntBASIC23.17■■□□□ 1.3
Ptch1Q61115 AC158538.2-201ENSMUST00000225455 906 ntBASIC23.17■■□□□ 1.3
Ptch1Q61115 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ptch1Q61115 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptch1Q61115 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC23.17■■□□□ 1.3
Ptch1Q61115 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC23.17■■□□□ 1.3
Ptch1Q61115 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptch1Q61115 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Gm9385-201ENSMUST00000117563 472 ntBASIC23.16■■□□□ 1.3
Ptch1Q61115 Gm13223-201ENSMUST00000118609 747 ntBASIC23.16■■□□□ 1.3
Ptch1Q61115 Gm18246-201ENSMUST00000221023 728 ntBASIC23.16■■□□□ 1.3
Ptch1Q61115 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ptch1Q61115 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC23.16■■□□□ 1.3
Ptch1Q61115 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC23.16■■□□□ 1.3
Ptch1Q61115 Gm12151-201ENSMUST00000121374 290 ntBASIC23.16■■□□□ 1.3
Ptch1Q61115 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC23.16■■□□□ 1.3
Ptch1Q61115 Gm43767-201ENSMUST00000198933 381 ntBASIC23.16■■□□□ 1.3
Ptch1Q61115 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC23.16■■□□□ 1.3
Ptch1Q61115 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptch1Q61115 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch1Q61115 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC23.15■■□□□ 1.3
Ptch1Q61115 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms