Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Gm11599-201ENSMUST00000118720 878 ntBASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-1Q5R1I8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-1Q5R1I8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Trav3-1Q5R1I8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Gm7432-201ENSMUST00000210343 879 ntBASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav3-1Q5R1I8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms