Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-2Q5R1I4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Gm7222-201ENSMUST00000117512 906 ntBASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Gm11594-201ENSMUST00000122313 162 ntBASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Gm5264-201ENSMUST00000190584 848 ntBASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-2Q5R1I4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Gm15467-201ENSMUST00000120582 445 ntBASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-2Q5R1I4 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Gm12260-201ENSMUST00000122447 411 ntBASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Mir6404-201ENSMUST00000183699 94 ntBASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-2Q5R1I4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6-2Q5R1I4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Gm11779-201ENSMUST00000118541 368 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms