Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-4Q5R1I0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-4Q5R1I0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-4Q5R1I0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6d-4Q5R1I0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms