Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3hdm4Q4VBF2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
R3hdm4Q4VBF2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
R3hdm4Q4VBF2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
R3hdm4Q4VBF2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Gm27867-201ENSMUST00000184778 125 ntBASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3hdm4Q4VBF2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3hdm4Q4VBF2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
R3hdm4Q4VBF2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
R3hdm4Q4VBF2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Gm44454-201ENSMUST00000198541 138 ntBASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
R3hdm4Q4VBF2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3hdm4Q4VBF2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
R3hdm4Q4VBF2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
R3hdm4Q4VBF2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
R3hdm4Q4VBF2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms