Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Gm25990-201ENSMUST00000102440 86 ntBASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Gm8097-201ENSMUST00000117903 829 ntBASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38aQ4FK66 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Mir5131-201ENSMUST00000175426 93 ntBASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 AW822252-206ENSMUST00000208904 237 ntBASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.81■□□□□ 0.6
Prpf38aQ4FK66 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38aQ4FK66 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Gm11780-201ENSMUST00000136880 516 ntBASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38aQ4FK66 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Gm7230-201ENSMUST00000173026 815 ntBASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38aQ4FK66 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms