Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC051142Q3V0M8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC051142Q3V0M8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC051142Q3V0M8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Mir770-201ENSMUST00000103252 94 ntBASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BC051142Q3V0M8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.27■□□□□ 0.36
BC051142Q3V0M8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms