Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim40Q3UWA4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Gm27275-201ENSMUST00000184318 272 ntBASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Gm37292-201ENSMUST00000192062 758 ntBASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Gm37025-201ENSMUST00000195159 829 ntBASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim40Q3UWA4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim40Q3UWA4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim40Q3UWA4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim40Q3UWA4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim40Q3UWA4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim40Q3UWA4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim40Q3UWA4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Gm12441-201ENSMUST00000121806 588 ntBASIC15.19■□□□□ 0.02
Trim40Q3UWA4 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Gm20049-201ENSMUST00000219950 730 ntBASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim40Q3UWA4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim40Q3UWA4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim40Q3UWA4 Sybu-209ENSMUST00000228639 4113 ntBASIC15.18■□□□□ 0.02
Trim40Q3UWA4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim40Q3UWA4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim40Q3UWA4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim40Q3UWA4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim40Q3UWA4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms