Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.22■□□□□ 0.67
SfswapQ3USH5 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.22■□□□□ 0.67
SfswapQ3USH5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SfswapQ3USH5 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.22■□□□□ 0.67
SfswapQ3USH5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.21■□□□□ 0.67
SfswapQ3USH5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Gm4459-201ENSMUST00000118750 468 ntBASIC19.21■□□□□ 0.67
SfswapQ3USH5 Gm13418-201ENSMUST00000119097 944 ntBASIC19.21■□□□□ 0.67
SfswapQ3USH5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SfswapQ3USH5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.2■□□□□ 0.66
SfswapQ3USH5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SfswapQ3USH5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Gm10060-201ENSMUST00000212002 111 ntBASIC19.19■□□□□ 0.66
SfswapQ3USH5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.19■□□□□ 0.66
SfswapQ3USH5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SfswapQ3USH5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.18■□□□□ 0.66
SfswapQ3USH5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Gm4535-201ENSMUST00000182274 558 ntBASIC19.18■□□□□ 0.66
SfswapQ3USH5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Gm10355-201ENSMUST00000097146 517 ntBASIC19.18■□□□□ 0.66
SfswapQ3USH5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SfswapQ3USH5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms