Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Gm15427-201ENSMUST00000117288 531 ntBASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Gm22175-201ENSMUST00000175007 78 ntBASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam196aQ3USH1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm11745-201ENSMUST00000121669 448 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm4518-201ENSMUST00000182638 718 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Mir6990-201ENSMUST00000183724 91 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm43474-201ENSMUST00000196415 774 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Fam196aQ3USH1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Gm13597-201ENSMUST00000121239 375 ntBASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms