Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Nhlrc4Q3UP44 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nhlrc4Q3UP44 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nhlrc4Q3UP44 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Gm17807-201ENSMUST00000186869 298 ntBASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nhlrc4Q3UP44 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Nhlrc4Q3UP44 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Mir6404-201ENSMUST00000183699 94 ntBASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nhlrc4Q3UP44 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms