Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf180Q3U827 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC18.94■□□□□ 0.62
Rnf180Q3U827 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf180Q3U827 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf180Q3U827 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf180Q3U827 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf180Q3U827 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.93■□□□□ 0.62
Rnf180Q3U827 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Gm9824-201ENSMUST00000178707 561 ntBASIC18.93■□□□□ 0.62
Rnf180Q3U827 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.93■□□□□ 0.62
Rnf180Q3U827 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf180Q3U827 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Gm9063-201ENSMUST00000223299 582 ntBASIC18.92■□□□□ 0.62
Rnf180Q3U827 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rnf180Q3U827 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Gm14767-201ENSMUST00000121559 586 ntBASIC18.91■□□□□ 0.62
Rnf180Q3U827 Gm12138-201ENSMUST00000122180 951 ntBASIC18.91■□□□□ 0.62
Rnf180Q3U827 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Gm18246-201ENSMUST00000221023 728 ntBASIC18.91■□□□□ 0.62
Rnf180Q3U827 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.91■□□□□ 0.62
Rnf180Q3U827 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf180Q3U827 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Rnf180Q3U827 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf180Q3U827 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf180Q3U827 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf180Q3U827 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Gm12008-201ENSMUST00000117791 755 ntBASIC18.89■□□□□ 0.61
Rnf180Q3U827 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf180Q3U827 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms