Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fndc4Q3TR08 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.81□□□□□ -0.2
Fndc4Q3TR08 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.8□□□□□ -0.2
Fndc4Q3TR08 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.8□□□□□ -0.2
Fndc4Q3TR08 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Il3ra-202ENSMUST00000223589 738 ntBASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Gm5417-201ENSMUST00000079706 384 ntBASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Prob1-201ENSMUST00000097619 3021 ntBASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fndc4Q3TR08 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Gm27000-201ENSMUST00000182943 842 ntBASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.79□□□□□ -0.2
Fndc4Q3TR08 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms