Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm8399-201ENSMUST00000082300 1117 ntBASIC8.58□□□□□ -1.04
Ush2AQ2QI47 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm8410-201ENSMUST00000117225 605 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm27892-201ENSMUST00000185017 106 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm43703-201ENSMUST00000200523 763 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm44974-201ENSMUST00000206387 1279 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 AC159747.1-201ENSMUST00000219903 265 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 CT009510.1-201ENSMUST00000227972 270 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm10478-201ENSMUST00000084451 396 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm6973-201ENSMUST00000117080 721 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm34220-201ENSMUST00000223001 2709 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Mir7070-201ENSMUST00000183657 86 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 AC125311.2-201ENSMUST00000227477 1940 ntBASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ush2AQ2QI47 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Gm29361-201ENSMUST00000183323 2000 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 AC159896.2-201ENSMUST00000214753 269 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 AC154319.1-201ENSMUST00000216330 312 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 AL589735.1-201ENSMUST00000224353 270 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 AC114008.2-201ENSMUST00000227699 1347 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Gm42853-201ENSMUST00000201273 1387 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Gm29667-201ENSMUST00000190817 490 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Gm3695-201ENSMUST00000087222 1009 ntBASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ush2AQ2QI47 Mir1982-201ENSMUST00000157368 74 ntBASIC8.55□□□□□ -1.04
Ush2AQ2QI47 Gm17420-201ENSMUST00000164753 153 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms