Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col10a1Q05306 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col10a1Q05306 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col10a1Q05306 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col10a1Q05306 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Col10a1Q05306 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.91□□□□□ -0.02
Col10a1Q05306 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col10a1Q05306 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col10a1Q05306 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Olfr129-201ENSMUST00000122318 993 ntBASIC14.91□□□□□ -0.02
Col10a1Q05306 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.91□□□□□ -0.02
Col10a1Q05306 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Col10a1Q05306 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col10a1Q05306 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col10a1Q05306 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.9□□□□□ -0.02
Col10a1Q05306 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Col10a1Q05306 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.9□□□□□ -0.02
Col10a1Q05306 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.9□□□□□ -0.02
Col10a1Q05306 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col10a1Q05306 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.9□□□□□ -0.02
Col10a1Q05306 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col10a1Q05306 Gm21362-201ENSMUST00000194272 928 ntBASIC14.9□□□□□ -0.02
Col10a1Q05306 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col10a1Q05306 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Col10a1Q05306 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col10a1Q05306 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.9□□□□□ -0.02
Col10a1Q05306 Dancr-204ENSMUST00000132389 2347 ntBASIC14.89□□□□□ -0.03
Col10a1Q05306 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col10a1Q05306 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col10a1Q05306 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.89□□□□□ -0.03
Col10a1Q05306 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col10a1Q05306 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col10a1Q05306 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col10a1Q05306 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.89□□□□□ -0.03
Col10a1Q05306 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.89□□□□□ -0.03
Col10a1Q05306 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col10a1Q05306 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.88□□□□□ -0.03
Col10a1Q05306 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms