Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Gm24513-201ENSMUST00000174964 138 ntBASIC20.3■□□□□ 0.84
Nkx2-3P97334 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-3P97334 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Gm27397-201ENSMUST00000184997 107 ntBASIC20.29■□□□□ 0.84
Nkx2-3P97334 Gm17968-201ENSMUST00000194902 784 ntBASIC20.29■□□□□ 0.84
Nkx2-3P97334 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-3P97334 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.28■□□□□ 0.84
Nkx2-3P97334 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.28■□□□□ 0.84
Nkx2-3P97334 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.28■□□□□ 0.84
Nkx2-3P97334 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.28■□□□□ 0.84
Nkx2-3P97334 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-3P97334 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.27■□□□□ 0.84
Nkx2-3P97334 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.27■□□□□ 0.84
Nkx2-3P97334 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-3P97334 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.27■□□□□ 0.83
Nkx2-3P97334 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx2-3P97334 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.27■□□□□ 0.83
Nkx2-3P97334 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Gm13216-201ENSMUST00000117145 591 ntBASIC20.26■□□□□ 0.83
Nkx2-3P97334 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Mir3113-201ENSMUST00000175478 76 ntBASIC20.26■□□□□ 0.83
Nkx2-3P97334 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Gm2756-201ENSMUST00000195851 400 ntBASIC20.26■□□□□ 0.83
Nkx2-3P97334 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.26■□□□□ 0.83
Nkx2-3P97334 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-3P97334 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.25■□□□□ 0.83
Nkx2-3P97334 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-3P97334 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms