Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
SgcbP82349 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SgcbP82349 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SgcbP82349 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.41□□□□□ -0.1
SgcbP82349 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.41□□□□□ -0.1
SgcbP82349 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SgcbP82349 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcbP82349 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SgcbP82349 Gm13216-201ENSMUST00000117145 591 ntBASIC14.4□□□□□ -0.1
SgcbP82349 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.4□□□□□ -0.1
SgcbP82349 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SgcbP82349 Gm27357-201ENSMUST00000183754 135 ntBASIC14.4□□□□□ -0.1
SgcbP82349 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.4□□□□□ -0.1
SgcbP82349 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SgcbP82349 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SgcbP82349 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcbP82349 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
SgcbP82349 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SgcbP82349 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SgcbP82349 Gm36967-201ENSMUST00000193814 266 ntBASIC14.39□□□□□ -0.11
SgcbP82349 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.39□□□□□ -0.11
SgcbP82349 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SgcbP82349 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcbP82349 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SgcbP82349 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SgcbP82349 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SgcbP82349 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.38□□□□□ -0.11
SgcbP82349 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SgcbP82349 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms