Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.47□□□□□ -0.25
Pdlim4P70271 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pdlim4P70271 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pdlim4P70271 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm11950-201ENSMUST00000121615 838 ntBASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm29518-201ENSMUST00000190858 372 ntBASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm17808-201ENSMUST00000200859 894 ntBASIC13.46□□□□□ -0.25
Pdlim4P70271 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.46□□□□□ -0.25
Pdlim4P70271 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.46□□□□□ -0.25
Pdlim4P70271 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim4P70271 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pdlim4P70271 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim4P70271 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim4P70271 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Pdlim4P70271 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.46□□□□□ -0.26
Pdlim4P70271 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim4P70271 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim4P70271 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.45□□□□□ -0.26
Pdlim4P70271 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pdlim4P70271 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pdlim4P70271 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.45□□□□□ -0.26
Pdlim4P70271 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.45□□□□□ -0.26
Pdlim4P70271 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pdlim4P70271 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim4P70271 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim4P70271 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim4P70271 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.44□□□□□ -0.26
Pdlim4P70271 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.44□□□□□ -0.26
Pdlim4P70271 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdlim4P70271 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.44□□□□□ -0.26
Pdlim4P70271 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim4P70271 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim4P70271 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms