Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Lhx1P63006 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Lhx1P63006 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Gm25406-201ENSMUST00000157599 105 ntBASIC15.85■□□□□ 0.13
Lhx1P63006 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.85■□□□□ 0.13
Lhx1P63006 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx1P63006 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Lhx1P63006 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lhx1P63006 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.84■□□□□ 0.13
Lhx1P63006 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Lhx1P63006 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.84■□□□□ 0.13
Lhx1P63006 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.84■□□□□ 0.13
Lhx1P63006 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.84■□□□□ 0.13
Lhx1P63006 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.84■□□□□ 0.13
Lhx1P63006 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx1P63006 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.84■□□□□ 0.13
Lhx1P63006 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.84■□□□□ 0.13
Lhx1P63006 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.83■□□□□ 0.13
Lhx1P63006 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lhx1P63006 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Lhx1P63006 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Lhx1P63006 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lhx1P63006 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.83■□□□□ 0.12
Lhx1P63006 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.83■□□□□ 0.12
Lhx1P63006 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.83■□□□□ 0.12
Lhx1P63006 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Lhx1P63006 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lhx1P63006 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx1P63006 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Lhx1P63006 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.82■□□□□ 0.12
Lhx1P63006 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.82■□□□□ 0.12
Lhx1P63006 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.82■□□□□ 0.12
Lhx1P63006 Gm12497-201ENSMUST00000138778 237 ntBASIC15.82■□□□□ 0.12
Lhx1P63006 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Gm5864-201ENSMUST00000202263 970 ntBASIC15.82■□□□□ 0.12
Lhx1P63006 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.82■□□□□ 0.12
Lhx1P63006 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.82■□□□□ 0.12
Lhx1P63006 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.82■□□□□ 0.12
Lhx1P63006 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.82■□□□□ 0.12
Lhx1P63006 Rps4l-201ENSMUST00000071745 943 ntBASIC15.82■□□□□ 0.12
Lhx1P63006 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Lhx1P63006 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lhx1P63006 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.82■□□□□ 0.12
Lhx1P63006 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lhx1P63006 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx1P63006 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms