Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabra1P62812 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gabra1P62812 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabra1P62812 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabra1P62812 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.66□□□□□ -0.22
Gabra1P62812 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gabra1P62812 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Gabra1P62812 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Gabra1P62812 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Gabra1P62812 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
Gabra1P62812 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.65□□□□□ -0.22
Gabra1P62812 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.65□□□□□ -0.22
Gabra1P62812 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabra1P62812 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Gabra1P62812 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.64□□□□□ -0.23
Gabra1P62812 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.64□□□□□ -0.23
Gabra1P62812 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.64□□□□□ -0.23
Gabra1P62812 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Gm13148-201ENSMUST00000118892 745 ntBASIC13.64□□□□□ -0.23
Gabra1P62812 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.64□□□□□ -0.23
Gabra1P62812 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.64□□□□□ -0.23
Gabra1P62812 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Gm4968-201ENSMUST00000071458 858 ntBASIC13.64□□□□□ -0.23
Gabra1P62812 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.64□□□□□ -0.23
Gabra1P62812 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gabra1P62812 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Gabra1P62812 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gabra1P62812 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.63□□□□□ -0.23
Gabra1P62812 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gabra1P62812 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Gabra1P62812 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.63□□□□□ -0.23
Gabra1P62812 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gabra1P62812 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Gabra1P62812 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gabra1P62812 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gabra1P62812 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms