Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.54□□□□□ -0.24
Lsm5P62322 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.54□□□□□ -0.24
Lsm5P62322 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Lsm5P62322 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.53□□□□□ -0.24
Lsm5P62322 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 AV356131-201ENSMUST00000206201 750 ntBASIC13.53□□□□□ -0.24
Lsm5P62322 Gm4974-201ENSMUST00000209974 875 ntBASIC13.53□□□□□ -0.24
Lsm5P62322 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lsm5P62322 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm5P62322 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm5P62322 Asic1-205ENSMUST00000228185 1818 ntBASIC13.53□□□□□ -0.24
Lsm5P62322 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.52□□□□□ -0.24
Lsm5P62322 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Lsm5P62322 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
Lsm5P62322 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm5P62322 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.52□□□□□ -0.25
Lsm5P62322 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.52□□□□□ -0.25
Lsm5P62322 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.52□□□□□ -0.25
Lsm5P62322 Gm42642-201ENSMUST00000200683 355 ntBASIC13.52□□□□□ -0.25
Lsm5P62322 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Lsm5P62322 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Lsm5P62322 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm5P62322 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Lsm5P62322 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.52□□□□□ -0.25
Lsm5P62322 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.52□□□□□ -0.25
Lsm5P62322 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Lsm5P62322 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm5P62322 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 App-207ENSMUST00000227737 2827 ntBASIC13.51□□□□□ -0.25
Lsm5P62322 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm5P62322 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lsm5P62322 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm5P62322 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm5P62322 Gm26524-201ENSMUST00000192339 390 ntBASIC13.51□□□□□ -0.25
Lsm5P62322 Rab3c-203ENSMUST00000224180 967 ntBASIC13.51□□□□□ -0.25
Lsm5P62322 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms