Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.7□□□□□ -0.38
Ctdsp1P58466 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.7□□□□□ -0.38
Ctdsp1P58466 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.69□□□□□ -0.38
Ctdsp1P58466 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Mir2861-201ENSMUST00000175539 82 ntBASIC12.69□□□□□ -0.38
Ctdsp1P58466 Gm9959-201ENSMUST00000068277 390 ntBASIC12.69□□□□□ -0.38
Ctdsp1P58466 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.69□□□□□ -0.38
Ctdsp1P58466 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ctdsp1P58466 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms