Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sssca1P56873 Actl10-202ENSMUST00000226583 1501 ntBASIC13.1□□□□□ -0.31
Sssca1P56873 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.1□□□□□ -0.31
Sssca1P56873 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.1□□□□□ -0.31
Sssca1P56873 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sssca1P56873 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.1□□□□□ -0.31
Sssca1P56873 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Sssca1P56873 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sssca1P56873 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sssca1P56873 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.09□□□□□ -0.31
Sssca1P56873 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Sssca1P56873 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.09□□□□□ -0.31
Sssca1P56873 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.09□□□□□ -0.31
Sssca1P56873 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.09□□□□□ -0.31
Sssca1P56873 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.09□□□□□ -0.31
Sssca1P56873 Timm23-208ENSMUST00000226683 750 ntBASIC13.09□□□□□ -0.31
Sssca1P56873 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.09□□□□□ -0.31
Sssca1P56873 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sssca1P56873 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.09□□□□□ -0.31
Sssca1P56873 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.09□□□□□ -0.31
Sssca1P56873 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sssca1P56873 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sssca1P56873 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.08□□□□□ -0.31
Sssca1P56873 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sssca1P56873 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.08□□□□□ -0.32
Sssca1P56873 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sssca1P56873 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.08□□□□□ -0.32
Sssca1P56873 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.08□□□□□ -0.32
Sssca1P56873 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.08□□□□□ -0.32
Sssca1P56873 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.08□□□□□ -0.32
Sssca1P56873 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sssca1P56873 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sssca1P56873 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.07□□□□□ -0.32
Sssca1P56873 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.07□□□□□ -0.32
Sssca1P56873 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sssca1P56873 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms