Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SmoP56726 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.22■□□□□ 0.19
SmoP56726 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.22■□□□□ 0.19
SmoP56726 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SmoP56726 Gm7461-201ENSMUST00000058918 827 ntBASIC16.22■□□□□ 0.19
SmoP56726 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SmoP56726 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SmoP56726 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SmoP56726 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SmoP56726 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SmoP56726 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SmoP56726 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SmoP56726 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SmoP56726 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SmoP56726 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.21■□□□□ 0.19
SmoP56726 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.21■□□□□ 0.19
SmoP56726 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.21■□□□□ 0.19
SmoP56726 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SmoP56726 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.21■□□□□ 0.19
SmoP56726 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.21■□□□□ 0.19
SmoP56726 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SmoP56726 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SmoP56726 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
SmoP56726 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SmoP56726 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.2■□□□□ 0.18
SmoP56726 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.2■□□□□ 0.18
SmoP56726 Gm28659-201ENSMUST00000188013 759 ntBASIC16.2■□□□□ 0.18
SmoP56726 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.2■□□□□ 0.18
SmoP56726 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SmoP56726 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Mir8098-201ENSMUST00000184011 137 ntBASIC16.19■□□□□ 0.18
SmoP56726 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.19■□□□□ 0.18
SmoP56726 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.19■□□□□ 0.18
SmoP56726 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.19■□□□□ 0.18
SmoP56726 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.19■□□□□ 0.18
SmoP56726 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.19■□□□□ 0.18
SmoP56726 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SmoP56726 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SmoP56726 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SmoP56726 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SmoP56726 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SmoP56726 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SmoP56726 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SmoP56726 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SmoP56726 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
SmoP56726 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SmoP56726 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.18■□□□□ 0.18
SmoP56726 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SmoP56726 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm13884-201ENSMUST00000118103 829 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm11452-201ENSMUST00000122376 690 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.18■□□□□ 0.18
SmoP56726 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SmoP56726 Gm44357-201ENSMUST00000195897 142 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm19658-201ENSMUST00000196231 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44367-201ENSMUST00000196836 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44350-201ENSMUST00000197197 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44390-201ENSMUST00000197533 144 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44313-201ENSMUST00000198018 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44486-201ENSMUST00000198508 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44314-201ENSMUST00000199263 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44394-201ENSMUST00000199558 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44484-201ENSMUST00000199873 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44466-201ENSMUST00000200264 138 ntBASIC16.18■□□□□ 0.18
SmoP56726 Gm44359-201ENSMUST00000200671 138 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms